Scans are photos, not text — so they need softer settings than born-digital PDFs.
Chrome's built-in viewer renders some PDFs where the overlay cannot reach. Open those from the extension popup in the experimental full-dark viewer (beta), which re-renders pages genuinely dark instead of overlaying them.
Try it: open your scan in the free web reader (files stay on-device) or install the Chrome / Edge extension. Also: Chrome guide, arXiv workflow.